I would replace them, don’t cost much and will save the hassle of possibly having to strip it all down again.
Also be aware on exhausts really it is best practice to retighten any manifold bolts/nuts after a couple of heat cycles have settled things down.
Just that if they are fully crushed and not compressed parallel, there is more likely to be a leak than if they mate up exactly as they were originally . I suppose it depends how much they were tightened initially
Not just tightened but more importantly how true the alignment was. Engineering tolerances sometimes cancel each other but not often.